Med3D

• Website:https://github.com/UL-FRI-LGM/Med3D

Med3D is a free open-source web-based 3D medical data visualisation application with support for displaying 3D mesh models (in form of OBJ files) as well as 3D volumetric data - such as CT and MRI scans (in form of MHR files).

Application enables remote collaboration between users, who can share data, view, annotations and can also communicate via integrated chat.

User can interact with application with use of 3D mouse (3D Connexion) or with Leap Motion controller using interact-io library.

Publications:

• Ž. Kokelj, C. Bohak, and M. Marolt, "A web-based virtual reality environment for medical visualization," in Mipro 2018 : 41st international convention, may 21 -25, 2018, opatija, croatia : proceedings, 2018, pp. 323-326.
  [Bibtex]

  @conference{1537798083,
  author={Žiga Kokelj and Ciril Bohak and Matija Marolt},
  year={2018},
  pages={323-326},
  title={A web-based virtual reality environment for medical visualization},
  booktitle={MIPRO 2018 : 41st International Convention, May 21 -25, 2018, Opatija, Croatia : proceedings},
  }

• P. Lavrič, C. Bohak, and M. Marolt, "Collaborative view-aligned annotations in web-based 3d medical data visualization," in Mipro 2017 : 40th jubilee international convention, may 22-26, 2017, opatija, croatia : proceedings, 2017, pp. 276-280.
  [Bibtex]

  @conference{1537435587,
  author={Primož Lavrič and Ciril Bohak and Matija Marolt},
  year={2017},
  pages={276-280},
  title={Collaborative view-aligned annotations in web-based 3D medical data visualization},
  booktitle={MIPRO 2017 : 40th Jubilee International Convention, May 22-26, 2017, Opatija, Croatia : proceedings},
  }

• C. Bohak, P. Lavrič, and M. Marolt, "Med3d - spletno vizualizacijsko ogrodje volumetričnih medicinskih podatkov s podporo oddaljenemu sodelovanju," in Delavnica elektronsko in mobilno zdravje : zbornik 19. mednarodne multikonference informacijska družba - is 2016, 10.-11. oktober 2016, [ljubljana, slovenija] : zvezek g = workshop electronic and mobile health : proceedings of the 19th international multiconference information society - is 2016, 10-11 october 2016, ljubljana, slovenia : volume g, 2016, pp. 14-16.
  [Bibtex]

  @conference{1537201859,
  author={Ciril Bohak and Primož Lavrič and Matija Marolt},
  year={2016},
  pages={14-16},
  title={Med3D - Spletno vizualizacijsko ogrodje volumetričnih medicinskih podatkov s podporo oddaljenemu sodelovanju},
  booktitle={Delavnica Elektronsko in mobilno zdravje : zbornik 19. mednarodne multikonference Informacijska družba - IS 2016, 10.-11. oktober 2016, [Ljubljana, Slovenija] : zvezek G = Workshop Electronic and Mobile Health : proceedings of the 19th International Multiconference Information Society - IS 2016, 10-11 October 2016, Ljubljana, Slovenia : volume G},
  }

• C. Bohak, P. Lavrič, and M. Marolt, "Remote interaction in web-based medical visual application," in Interakcija človek-računalnik v informacijski družbi : zbornik 19. mednarodne multikonference informacijska družba - is 2016, 11. oktober 2016, [ljubljana, slovenija] : zvezek e = human-computer interaction in information society : proceedings of the 19th international multiconference information society - is 2016, 11 october 2016, ljubljana, slovenia : volume e, 2016, pp. 5-8.
  [Bibtex]

  @conference{1537200835,
  author={Ciril Bohak and Primož Lavrič and Matija Marolt},
  year={2016},
  pages={5-8},
  title={Remote interaction in web-based medical visual application},
  booktitle={Interakcija človek-računalnik v informacijski družbi : zbornik 19. mednarodne multikonference Informacijska družba - IS 2016, 11. oktober 2016, [Ljubljana, Slovenija] : zvezek E = Human-computer interaction in information society : proceedings of the 19th International Multiconference Information Society - IS 2016, 11 October 2016, Ljubljana, Slovenia : volume E},
  }

• P. Lavrič, C. Bohak, and M. Marolt, "Spletno vizualizacijsko ogrodje z možnostjo oddaljenega sodelovanja," in Zbornik petindvajsete mednarodne elektrotehniške in računalniške konference erk 2016, 19. - 21. september 2016, portorož, slovenija, 2016, pp. 43-46.
  [Bibtex]

  @conference{1537130179,
  author={Primož Lavrič and Ciril Bohak and Matija Marolt},
  year={2016},
  pages={43-46},
  title={Spletno vizualizacijsko ogrodje z možnostjo oddaljenega sodelovanja},
  booktitle={Zbornik petindvajsete mednarodne Elektrotehniške in računalniške konference ERK 2016, 19. - 21. september 2016, Portorož, Slovenija},
  }

• Ž. Lesar, C. Bohak, and M. Marolt, "Evaluation of angiogram visualization methods for fast and reliable aneurysm diagnosis," in Medical imaging 2015 : image perception, observer performance, and technology assessment : 25-26 february 2015, orlando, florida, united states, 2015, pp. 1-8.
  [Bibtex]

  @conference{1536347587,
  author={Žiga Lesar and Ciril Bohak and Matija Marolt},
  year={2015},
  pages={1-8},
  title={Evaluation of angiogram visualization methods for fast and reliable aneurysm diagnosis},
  booktitle={Medical imaging 2015 : image perception, observer performance, and technology assessment : 25-26 February 2015, Orlando, Florida, United States},
  }

• C. Bohak, A. Sodja, M. Marolt, U. Mitrović, and F. Pernuš, "Fast segmentation, conversion and rendering of volumetric data using gpu," in Iwssip 2014 : proceedings, 2014, pp. 239-242.
  [Bibtex]

  @conference{10577236,
  author={Ciril Bohak and Anže Sodja and Matija Marolt and Uroš Mitrović and Franjo Pernuš},
  year={2014},
  pages={239-242},
  title={Fast segmentation, conversion and rendering of volumetric data using GPU},
  booktitle={IWSSIP 2014 : proceedings},
  }

• P. Škrlj, J. Guna, C. Bohak, and M. Marolt, "Usability evaluation of input devices for navigation and interaction in 3d visualisation," in Proceedings of the 7th international workshop on semantic ambient media experience (same 2014) - ambient media usability, interaction, and smart media technologies : helsinki, finland, 26th october 2014, 2014, pp. 19-23.
  [Bibtex]

  @conference{1536206019,
  author={Peter Škrlj and Jože Guna and Ciril Bohak and Matija Marolt},
  year={2014},
  pages={19-23},
  title={Usability evaluation of input devices for navigation and interaction in 3D visualisation},
  booktitle={Proceedings of the 7th International Workshop on Semantic Ambient Media Experience (SAME 2014) - Ambient Media Usability, Interaction, and Smart Media Technologies : Helsinki, Finland, 26th October 2014},
  }